Publications

Gene-by-environment interactions modulate the infant gut microbiota in asthma and atopy
Stickley SA, Fang ZY, Ambalavanan A, Zhang Y, Zacharias AM, Petersen C, Dai D, Azad MB, Brook JR, Mandhane PJ, Simon E, Moraes TJ, Surette MG, Turvey SE, Subbarao P, Duan Q
J Allergy Clin Immunol 2025 Apr 3:S0091-6749(25)00368-9. PMID: 40187613

Younger epigenetic age is associated with higher cardiorespiratory fitness in individuals with airflow limitation
Hernandez Cordero A, Peters C, Li X, Yang CX, Ambalavanan A, MacIsaac J, Kobor M, Fonseca G, Doiron D, Tan W, Bourbeau J, Jensen D, Sin D, Koelwyn G, Stickland M, Duan Q, Leung J
iScience 2024 Sep 13;27(10):110934. PMID: 39391738

Networks of human milk microbiota are associated with host genomics, childhood asthma and allergic sensitization
Fang ZY, Stickley SA, Ambalavanan A, Zhang Y, Zacharias A, Fehr K, Moossavi S, Petersen C, Miliku K, Mandhane PJ, Simons E, Moraes TJ, Sears MR, Surette MG, Subbarao P, Turvey SE, Azad MB, Duan Q
Cell Host & Microbe 2024 Oct 9;32(10):1838-1852.e5. PMID: 39293435

Human milk oligosaccharides are determined by maternal genetics and protect lung health of milk-fed infants in the CHILD Study
Ambalavanan A, Chang L, Zhang Y, Choi J, Fang ZY, Stickley SA, Robertson B, Yonemitsu C, Turvey SE, Mandhane PJ, Becker AB, Moraes TJ, Anand SS, Paré G, Lefebvre DL, Sears MR, Subbarao P, Bode L, Azad MB, Duan Q
Nat Commun 2024 Sep 4;15(1):7735. PMID: 39232002

Cannabis smoking is associated with advanced epigenetic age
Hernandez Cordero A, Li X, Yang CX, Ambalavanan A, MacIsaac J, Kobor M, Doiron D, Tan W, Bourbeau J, Sin D, Duan Q, Leung J
Eur Respir J 2024 May 2;63(5):2400458. PMID: 38609099

Dysanapsis genetic risk predicts lung function across the lifespan
Debban CL, Ambalavanan A, Ghosh A, Li Z, Buschur KL, Ma Y, Pistenmaa C, Bertoni AG, Oelsner EC, Michos ED, Moraes TJ, Jacobs DR Jr., Christenson S, Bhatt SP, Kaner RJ, Simons E, Turvey SE, Vameghestahbanati M, Engert JC, Kirby M, Bourbeau J, Tan WC, Gabriel SB, Gupta N, Woodruff PG, Lappalainen T, Subbarao P, Ortega VE, Bleecker ER, Meyers DA, Rich SS, Hoffman EA, Barr RG, Cho MH, Bossé Y, Duan Q, Manichaikul A, Smith BM
Eur Respir J 2024 Jun 27. PMID: 38935874

Persistent DNA methylation changes associated with prenatal NO2 exposure in a Canadian prospective birth study
Lee S, Sbihi H, MacIsaac JL, Ambalavanan A, Mandhane PJ, Moraes TJ, Turvey SE, Duan Q, Subbarao P, Brauer M, Brook JR, Kobor MS, Jones MJ
Environ Health Perspect 2024 Apr;132(4):47004. PMID: 38573328

Novel MicroRNA-Regulated Transcript Networks Are Associated with Chemotherapy Response in Ovarian Cancer
Topouza DG, Choi J, Nesdoly S, Tarnouskaya A, Nicol CJB, Duan QL
Int J Mol Sci 2022 Apr 28;23(9):4875. PMID: 35563265

Investigating the relationship between melatonin patterns and methylation in circadian genes among day shift and night shift workers
Ritonja JA, Aronson KJ, Leung M, Flaten L, Topouza DG, Duan Q, Durocher F, Tranmer JE, Bhatti P
Occup Environ Med 2022 May 2:oemed-2021-108111. PMID: 35501127

DNA methylation of circadian genes and markers of cardiometabolic risk in female hospital workers: An exploratory study
Ahmadi SA, Tranmer JE, Ritonja JA, Flaten L, Topouza DG, Duan Q, Durocher F, Aronson KJ, Bhatti P
Chronobiol Int 2022 May;39(5):735-746. PMID: 35109725

Wheeze trajectories: Determinants and outcomes in the CHILD Cohort Study
Dai R, Miliku K, Gaddipati S, Choi J, Ambalavanan A, Tran MM, Reyna M, Sbihi H, Lou W, Parvulescu P, Lefebvre DL, Becker AB, Azad MB, Mandhane PJ, Turvey SE, Duan Q, Moraes TJ, Sears MR, Subbarao P
J Allergy Clin Immunol 2022 Jun;149(6):2153-2165. PMID: 34974064

Exploring the impact of night shift work on methylation of circadian genes
Ritonja JA, Aronson KJ, Flaten L, Topouza DG, Duan Q, Durocher F, Tranmer JE, Bhatti P
Epigenetics 2022 Oct;17(10):1259-1268. PMID: 34825628

Polygenic risk score for atopic dermatitis in the Canadian population
Simard M, Madore AM, Girard S, Waserman S, Duan QL, Subbarao P, Sears MR, Moraes TJ, Becker AB, Turvey SE, Mandhane PJ, Morin C, Bégin P, Laprise C
J Aller and Clinical Immunol 2020; S0091-6749(20)30725-9. PMID: 32439431

Gene networks and expression quantitative trait loci associated with adjuvant chemotherapy response in high-grade serous ovarian cancer
Choi J, Topouza DG, Tarnouskaya A, Nesdoly S, Koti M, Duan QL
BMC Cancer 2020; 20,413. PMID: 32404140

Human milk fatty acid composition is associated with dietary, genetic, sociodemographic, and environmental factors in the CHILD Cohort Study
Miliku K, Duan QL, Moraes TJ, Becker AB, Mandhane PJ, Turvey SE, Lefebvre DL, Sears MR, Subbarao P, Field C, and Azad M
Am J Clinical Nutrition 2019; 110(6):1370-1383. PMID: 31589250

Prenatal Depression and Birth Mode Sequentially Mediate Maternal Education’s Influence on Infant Sleep Duration
Matenchuk BA, Tamana SK, Lou WYW, Lefebvre DL, Sears MR, Becker AB, … CHILD Study Investigators
Sleep Medicine 2019; 59:24-32. PMID: 31153013

Integrated Analysis of Human Milk Microbiota with Oligosaccharides and Fatty Acids in the CHILD Cohort
Moossavi S, Atakora F, Miliku K, Sepehri S, Robertson B, Duan QL, Becker AB,Mandhane PJ, Turvey SE, Moraes TJ, Lefebvre DL, Sears MR, Subbarao P, Field CJ, Bode L, Khafipour E, Azad MB
Frontiers in Nutrition 2019; 6:58. PMID: 31157227

Maternal Metabolic Complications in Pregnancy and Offspring Behavior Problems at 2 Years of Age
Krzeczkowski JE, Lau A, Fitzpatrick J, Tamana S, Smithson L, de Souza R, … CHILD Study Investigators
Maternal and Child Health Journal 2019; 23(6):746–755. PMID: 30600520

Residential green space and pathways to term birth weight in the Canadian Healthy Infant Longitudinal Development (CHILD) Study
Cusack L, Sbihi H, Larkin A, Chow A, Brook JR, Moraes T, … CHILD Study Investigators
International Journal of Health Geographics 2018; 17(1):43. PMID: 30514315

Diagnosing atopic dermatitis in infancy: Questionnaire reports vs criteria-based assessment
Dharma C, Lefebvre DL, Tran MM, Lu Z, Lou WYW, Subbarao P, … CHILD Study Investigators
Paediatric and perinatal epidemiology 2018; 32(6):556-567. PMID: 30461044

Patterns of allergic sensitization and atopic dermatitis from 1 to 3 years: Effects on allergic diseases
Dharma C, Lefebvre DL, Tran MM, Lou WYW, Subbarao P, Becker AB, … CHILD Study Investigators
Clinical and Experimental Allergy 2018; 48(1):48-59. PMID: 29143385

Predicting the atopic march: Results from the Canadian Healthy Infant Longitudinal Development Study
Tran MM, Lefebvre DL, Dharma C, Dai D, Lou WYW, Subbarao P, … Canadian Healthy Infant Longitudinal Development Study investigators
J Aller and Clinical Immunol 2018; 141(2):601-607.e8. PMID: 29153857

Cesarean Section, Formula Feeding, and Infant Antibiotic Exposure: Separate and Combined Impacts on Gut Microbial Changes in Later Infancy
Yasmin F, Tun HM, Konya TB, Guttman DS, Chari RS, Field CJ, … CHILD Study Investigators
Frontiers in Pediatrics 2017; 5:200. PMID: 29018787

Modes of Infant Feeding and the Risk of Childhood Asthma: A Prospective Birth Cohort Study
Klopp A, Vehling L, Becker AB, Subbarao P, Mandhane PJ, Turvey SE, … CHILD Study Investigators, Azad MB
The Journal of Pediatrics 2017; 190:192–199. PMID: 29144244

Exposure to household furry pets influences the gut microbiota of infant at 3-4 months following various birth scenarios
Tun HM, Konya T, Takaro TK, Brook JR, Chari R, Field CJ, … CHILD Study Investigators
Microbiome 2017; 5(1):40. PMID: 28381231

Timing of food introduction and development of food sensitization in a prospective birth cohort
Tran MM, Lefebvre DL, Dai D, Dharma C, Subbarao P, Lou W, … CHILD Study Investigators
Pediatric Allergy and Immunology 2017; 28(5): 471-477. PMID: 28557044

Fecal Short-Chain Fatty Acid Variations by Breastfeeding Status in Infants at 4 Months: Differences in Relative versus Absolute Concentrations
Bridgman SL, Azad MB, Field CJ, Haqq AM, Becker AB, Mandhane PJ, … CHILD Study Investigators
Frontiers in Nutrition 2017; 4(11). PMID: 28443284
Whole genome sequencing identifies high-impact variants within well-known pharmacogenomic genes
Choi J, Tantisira KG, Duan QL
The Pharmacogenomics J. 2019; 19(2):127-135. PMID: 30214008

Identification of deleterious and regulatory genomic variations in known asthma loci
Neville M, Choi J, Lieberman J, Duan QL
Respiratory Research 2018; 19(1):248. PMID: 30541564

Stress and Bronchodilator Response in Children with Asthma
Brehm JM, Ramratnam SK, Tse SM, Croteau-Chonka DC, Pino-Yanes M, Rosas-Salazar C, … Duan QL, … Celedón JC
Am J Respir Crit Care Med 2015; 192(1):47-56. PMID: 25918834

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